- Short answer
- Click Collect payment, then Mark as paid, once the money reached you outside Shopify; nothing is charged, and we found no documented undo.
- Draft orders
- Collect payment > Mark as paid, then Create order turns the draft into an order
- Money
- Not captured again; no third-party transaction fee on drafts marked paid or manual payment methods
- No Mark as paid?
- Might be missing on Payment pending orders not paid by credit card; not yet supported on subscription drafts
- Way back
- Delete manual-payment orders or orders from drafts marked paid once archived or canceled; an admin refund can't be reversed
How do you mark an order or a draft order as paid?
Use it when the customer paid outside Shopify, by bank deposit or cash on delivery, or when you import a past order from another platform.
On an order:
- Go to Orders and open the order.
- In the Payment pending section, click Collect payment.
- Choose Mark as paid.
- Orders
- Order details
On a draft order:
- Go to Orders > Drafts and open the draft.
- Click Collect payment, then Mark as paid.
- Click Create order.
- Orders
- Drafts
What changes when you mark an order as paid?
No money moves: your payment provider doesn't capture the amount again.
- The payment status becomes Paid.
- The customer gets an order confirmation email; from a draft, only if it has their email or phone number.
- No third-party transaction fee applies to draft orders marked as paid or to manual payment methods.
- Orders
- Order details
When is Mark as paid missing, and can you undo it?
- On a Payment pending order where the customer used a different payment method than a credit card, Shopify says you "might be unable" to mark it as paid. Which pending payments block Mark as paid.
- On a draft with a subscription product, marking it paid is "coming soon" as of November 2026; send an invoice instead.
None of the help pages we read on November 10, 2026 (payments, draft orders, refunds, cancellations) describes unmarking an order or a separate refund step for a manual payment, and an admin refund can't be reversed.
The nearest way back is removal: an order that started as a draft and was marked as paid, or one paid with a manual payment method, can be deleted once archived or canceled, and then leaves your reports. Orders paid with a gift card can be archived, but not deleted.
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